Biological Physics

Authors and titles for October 2024

[1] arXiv:2410.00559 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: A fluctuation-sensitivity-timescale trade-off in feedback-controlled dynamics Show Chinese title

Title: 反馈控制动力学中的波动-敏感性-时间尺度权衡

Ka Kit Kong, Feng Liu

Subjects: Biological Physics (physics.bio-ph)

[2] arXiv:2410.01867 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Electrochemical removal of antibiotics and multidrug-resistant bacteria using S-functionalized graphene sponge electrodes Show Chinese title

Title: 使用S功能化石墨烯海绵电极电化学去除抗生素和多重耐药细菌

Natalia Ormeno Cano, Jelena Radjenovic

Comments: 24 pages with 4 figures and 1 table, and Supplementary Material with five texts, 11 tables and 5 figures

Journal-ref: Journal of Cleaner Production, 2024, 470,143245

Subjects: Biological Physics (physics.bio-ph) ; Materials Science (cond-mat.mtrl-sci)

[3] arXiv:2410.03324 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Longitudinal photoacoustic monitoring of collagen evolution modulated by cancer-associated fibroblasts: simulation and experiment studies Show Chinese title

Title: 癌相关成纤维细胞调控胶原蛋白演化的纵向光声监测：仿真与实验研究

Jiayan Li, Lu Bai, Junmei Cao, Wenxiang Zhi, Qian Cheng

Comments: 4 pages, 5 figures,conference

Subjects: Biological Physics (physics.bio-ph) ; Tissues and Organs (q-bio.TO)

[4] arXiv:2410.03328 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Double-Strand Break Clustering: An Economical and Effective Strategy for DNA Repair Show Chinese title

Title: 双链断裂聚集：一种经济有效的DNA修复策略

Junyi Chen, Wenzong Ma, Yuqi Ma, Gen Yang

Subjects: Biological Physics (physics.bio-ph) ; Biomolecules (q-bio.BM)

[5] arXiv:2410.03344 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Surface tension-driven boundary growth in tumour spheroids Show Chinese title

Title: 肿瘤球体中由表面张力驱动的边界生长

D. Riccobelli

Journal-ref: Interface Focus, 15(2), article n. 20240035, 2025

Subjects: Biological Physics (physics.bio-ph) ; Soft Condensed Matter (cond-mat.soft)

[6] arXiv:2410.03395 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Local Clustering and Global Spreading of Receptors for Optimal Spatial Gradient Sensing Show Chinese title

Title: 最佳空间梯度感应的受体局部聚类和全局扩散

Albert Alonso, Robert G. Endres, Julius B. Kirkegaard

Comments: This version has been accepted for publication in Physical Review Letters. The final version is available at https://doi.org/10.1103/PhysRevLett.134.158401. Title has changed

Journal-ref: Phys. Rev. Lett. 134, 158401 (2025)

Subjects: Biological Physics (physics.bio-ph) ; Soft Condensed Matter (cond-mat.soft) ; Information Theory (cs.IT) ; Cell Behavior (q-bio.CB)

[7] arXiv:2410.03404 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Photoacoustic tracking of photo-magnetically powered nanoparticles for cancer therapy Show Chinese title

Title: 光声追踪用于癌症治疗的光磁驱动纳米粒子

Jiayan Li, Chang Xu, Yingna Chen, Junmei Cao, Wanli Ye, Yu Cheng, Qian Cheng

Subjects: Biological Physics (physics.bio-ph) ; Medical Physics (physics.med-ph)

[8] arXiv:2410.03641 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Slower swimming promotes chemotactic encounters between bacteria and small phytoplankton Show Chinese title

Title: 较慢的游泳促进了细菌和小型浮游植物之间的趋化相遇

Riccardo Foffi, Douglas R. Brumley, François Peaudecerf, Roman Stocker, Jonasz Słomka

Subjects: Biological Physics (physics.bio-ph)

[9] arXiv:2410.03899 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Phycobilisome core architecture influences photoprotective quenching by the Orange Carotenoid Protein Show Chinese title

Title: 藻胆体核心结构影响橙色类胡萝卜素蛋白的光保护淬灭

Ayesha Ejaz, Markus Sutter, Sigal Lechno-Yossef, Cheryl A. Kerfeld, Allison Squires

Subjects: Biological Physics (physics.bio-ph)

[10] arXiv:2410.06002 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Optimizing Non-Intersecting Synthetic Vascular Trees in Nonconvex Organs Show Chinese title

Title: 在非凸器官中优化非相交的合成血管树

Etienne Jessen, Marc C. Steinbach, Dominik Schillinger

Subjects: Biological Physics (physics.bio-ph) ; Tissues and Organs (q-bio.TO)

[11] arXiv:2410.06361 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Hierarchy of chaotic dynamics in random modular networks Show Chinese title

Title: 随机模块网络中的混沌动力学层次结构

Łukasz Kuśmierz, Ulises Pereira-Obilinovic, Zhixin Lu, Dana Mastrovito, Stefan Mihalas

Comments: To appear in Physical Review Letters

Subjects: Biological Physics (physics.bio-ph) ; Disordered Systems and Neural Networks (cond-mat.dis-nn) ; Neural and Evolutionary Computing (cs.NE) ; Chaotic Dynamics (nlin.CD) ; Neurons and Cognition (q-bio.NC)

[12] arXiv:2410.06821 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Curved edges in the vertex model increase tissue fluidity Show Chinese title

Title: 顶点模型中的曲线边增加组织流动性

Michael F. Staddon, Carl D. Modes

Subjects: Biological Physics (physics.bio-ph) ; Tissues and Organs (q-bio.TO)

[13] arXiv:2410.07012 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Fluid flow generates bacterial conjugation hotspots by increasing the rate of shear-driven cell-cell encounters Show Chinese title

Title: 流体流动通过增加剪切驱动的细胞-细胞接触速率产生细菌接合热点

Matti Zbinden, Jana S. Huisman, Natasha Blitvic, Roman Stocker, Jonasz Słomka

Journal-ref: M. Zbinden, J.S. Huisman, N. Blitvic, R. Stocker, and J. S{\l}omka, Proc. Natl. Acad. Sci. U.S.A. 122 (32) e2505446122, 2025

Subjects: Biological Physics (physics.bio-ph)

[14] arXiv:2410.07186 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Approaching the quantum limit of energy resolution in animal magnetoreception Show Chinese title

Title: 接近动物磁感应中的能量分辨率量子极限

I. K. Kominis, E. Gkoudinakis

Comments: 16 pages, 6 figures

Journal-ref: PRX Life 3, 013004 (2025)

Subjects: Biological Physics (physics.bio-ph) ; Chemical Physics (physics.chem-ph) ; Quantum Physics (quant-ph)

[15] arXiv:2410.08798 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Cooperative and Inhibitory Ion Transport in Functionalized Angstrom-Scale Two-Dimensional Channels Show Chinese title

Title: 功能化埃尺度二维通道中的协同与抑制离子传输

Mingzhan Wang, Qinsi Xiong, Gangbin Yan, Yu Han, Xiaolin Yue, Zhiheng Lyu, Zhen Li, Leeann Sun, Eli Hoenig, Kangli Xu, Nicholas H. C. Lewis, Kenneth M. Merz Jr., Qian Chen, George C. Schatz, Chong Liu

Comments: 34 pages for main text and 40 pages for SI

Subjects: Biological Physics (physics.bio-ph) ; Chemical Physics (physics.chem-ph)

[16] arXiv:2410.09264 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Perceived risk determines spatial position in fish shoals through altered rules of interaction Show Chinese title

Title: 感知风险通过改变交互规则决定鱼类鱼群中的空间位置

Andreu Puy, Elisabet Gimeno, Francesc S. Beltran, Ruth Dolado, M. Carmen Miguel, Christos C. Ioannou, Romualdo Pastor-Satorras

Comments: Main paper (12 pages) + Supplementary Information (14 pages)

Subjects: Biological Physics (physics.bio-ph) ; Physics and Society (physics.soc-ph)

[17] arXiv:2410.09447 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Evolutionary origin of the bipartite architecture of dissipative cellular networks Show Chinese title

Title: 耗散细胞网络二部结构的进化起源

Bowen Shi, Long Qian, Qi Ouyang

Comments: 12 pages, 6 figures

Subjects: Biological Physics (physics.bio-ph) ; Molecular Networks (q-bio.MN)

[18] arXiv:2410.09469 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Combinatorial Exploration of Multidrug Polyspecificity in Efflux Pumps Show Chinese title

Title: 多药外排泵的多药多特异性组合探索

Fabio Deelan Cunden, Juan Carlos Jimenez-Castellanos

Comments: 3 pages

Subjects: Biological Physics (physics.bio-ph)

[19] arXiv:2410.10231 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Tethered Particle Motion Technique in Crowded Media: Compaction of DNA by Globular Macromolecules Show Chinese title

Title: 拥挤介质中的束缚粒子运动技术：球状大分子对DNA的压缩

Marc Joyeux (LIPhy)

Journal-ref: Journal of Physical Chemistry B, 2024, 128 (29), pp.7227-7236

Subjects: Biological Physics (physics.bio-ph) ; Soft Condensed Matter (cond-mat.soft)

[20] arXiv:2410.10236 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Transcribing RNA polymerases: Dynamics of Twin Supercoiled Domains Show Chinese title

Title: 转录RNA聚合酶：双超螺旋结构域的动力学

Marc Joyeux (LIPhy)

Comments: Biophysical Journal, In press

Subjects: Biological Physics (physics.bio-ph)

[21] arXiv:2410.10895 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Multidomain Model for Optic Nerve Potassium Clearance: Roles of Glial Cells and Perivascular Spaces Show Chinese title

Title: 多区域模型用于视神经钾清除：胶质细胞和血管周围空间的作用

Shanfeng Xiao, Huaxiong Huang, Robert Eisenberg, Zilong Song, Shixin Xu

Subjects: Biological Physics (physics.bio-ph) ; Dynamical Systems (math.DS)

[22] arXiv:2410.10932 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Damage and recovery of flagella in soil bacteria exposed to shear within long microchannels Show Chinese title

Title: 土壤细菌在长微通道内受到剪切力后的鞭毛损伤与恢复

Juan Pablo Carrillo-Mora, Moniellen Pires Monteiro, Aníbal R. Lodeiro, V. I. Marconi, María Luisa Cordero

Comments: 24 pages, 5 figures Accepted in Physics of Fluids

Subjects: Biological Physics (physics.bio-ph) ; Soft Condensed Matter (cond-mat.soft)

[23] arXiv:2410.11384 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Role of Delay in Brain Dynamics Show Chinese title

Title: 延迟在脑动力学中的作用

Yuval Meir, Ofek Tevet, Yarden Tzach, Shiri Hodassman, Ido Kanter

Comments: 18 pages, 3 figures, 2 tables

Journal-ref: Physica A, Statistical Mechanics and its Applications (2024), 130166

Subjects: Biological Physics (physics.bio-ph) ; Artificial Intelligence (cs.AI)

[24] arXiv:2410.12081 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Quantifying cellular autonomy in multi-cue environments Show Chinese title

Title: 量化多线索环境中的细胞自主性

Louis Gonzalez, Hogyeong Gwak, Bumsoo Han, Andrew Mugler

Comments: 12 pages, 5 figures

Subjects: Biological Physics (physics.bio-ph) ; Molecular Networks (q-bio.MN)

[25] arXiv:2410.14244 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Pattern formation in e. coli through negative chemotaxis: instability, condensation, and merging Show Chinese title

Title: 通过负趋化作用在大肠杆菌中的模式形成：不稳定性、凝聚和合并

Nir Livne, Ady Vaknin, Oded Agam

Subjects: Biological Physics (physics.bio-ph)

[26] arXiv:2410.14297 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Two-component model of a microtubule in a semi-discrete approximation Show Chinese title

Title: 微管的两组分半离散模型

Slobodan Zdravković, Aleksandr N. Bugay, Slobodan Zeković, Dragana Ranković, Jovana Petrović

Subjects: Biological Physics (physics.bio-ph) ; Pattern Formation and Solitons (nlin.PS)

[27] arXiv:2410.14561 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Intrinsic cell-to-cell variance from experimental single-cell motility data Show Chinese title

Title: 从实验单细胞运动数据中固有的细胞间方差

Anton Klimek, Johannes C. J. Heyn, Debasmita Mondal, Sophia Schwartz, Joachim O. Rädler, Prerna Sharma, Stephan Block, Roland R. Netz

Comments: 10 pages main text including 6 figures , 3pages methods, 15 pages supplementary information including 8 more figures

Journal-ref: PRX Life 3, 023015 (2025)

Subjects: Biological Physics (physics.bio-ph)

[28] arXiv:2410.14621 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: JAMUN: Bridging Smoothed Molecular Dynamics and Score-Based Learning for Conformational Ensembles Show Chinese title

Title: JAMUN：连接平滑分子动力学与基于分数的学习以生成构象集合

Ameya Daigavane, Bodhi P. Vani, Darcy Davidson, Saeed Saremi, Joshua Rackers, Joseph Kleinhenz

Comments: 34 pages, presented at GenBio workshop at ICML 2025, under review

Subjects: Biological Physics (physics.bio-ph) ; Machine Learning (cs.LG) ; Biomolecules (q-bio.BM)

[29] arXiv:2410.14930 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Surface-Emitting Resonator Interference Microscopy for Label-Free Monitoring of Membrane Dynamics Show Chinese title

Title: 表面发射谐振干涉显微镜用于无标记的膜动力学监测

Chaoyang Gong, Yu-Cheng Chen

Subjects: Biological Physics (physics.bio-ph) ; Optics (physics.optics)

[30] arXiv:2410.15197 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Effect of Temperature and TiO$_{2}$ NP Concentration on DNA Stability under Conditions Close to Physiological Ones Show Chinese title

Title: 温度和TiO$_{2}$ NP浓度在接近生理条件下的DNA稳定性影响

Evgeniya Usenko, Anastasiia Svidzerska, Alexander Glamazda, Vladimir Valeev, Anna Laguta, Victor Karachevtsev

Comments: 17 pages, 5 figures. arXiv admin note: text overlap with arXiv:2308.13444

Journal-ref: Colloid Polym Sci 302 (2024) 23-30

Subjects: Biological Physics (physics.bio-ph)

[31] arXiv:2410.16772 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: A new angle on the well-known FMO photosynthetic complex Show Chinese title

Title: 对众所周知的FMO光合作用复合物的新角度

A.-M Daré (AMU, IM2NP), C Demarez, J Missirian, F Michelini

Subjects: Biological Physics (physics.bio-ph)

[32] arXiv:2410.17795 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: A Fluorescent Ratiometric Potassium Sensor Based on IPG4-Silica Microparticles for Selective Detection and Fluorescence Imaging of Potassium Cations Show Chinese title

Title: 基于IPG4-二氧化硅微粒的荧光比率钾传感器用于钾阳离子的选择性检测和荧光成像

Francesco Colella, Stefania Forciniti, Valentina Onesto, Giuliana Grasso, Helena Iuele, Giuseppe Gigli, Loretta L. del Mercato

Journal-ref: Journal of Materials Chemistry B 2024,10573

Subjects: Biological Physics (physics.bio-ph) ; Chemical Physics (physics.chem-ph)

[33] arXiv:2410.18133 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Super-resolved anomalous diffusion: deciphering the joint distribution of anomalous exponent and diffusion coefficient Show Chinese title

Title: 超分辨率异常扩散：解码异常指数和扩散系数的联合分布

Yann Lanoiselée, Gianni Pagnini, Agnieszka Wyłomańska

Comments: 8 pages, 2 figures

Journal-ref: Phys. Rev. Lett. 135, (2025) 137101

Subjects: Biological Physics (physics.bio-ph) ; Statistical Mechanics (cond-mat.stat-mech) ; Probability (math.PR) ; Data Analysis, Statistics and Probability (physics.data-an)

[34] arXiv:2410.18149 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Quantum Algorithms for Optimizing Mycorrhizal Inoculants Using Mycoponics: A Novel Framework for Nutrient Transfer and Protein Discovery in Precision Agriculture Show Chinese title

Title: 基于真菌培养技术的量子算法优化菌根接种剂：精准农业中营养物质转移与蛋白质发现的新框架

Abhiram Sripat

Comments: Will require further experimental data from Professor Porterfield

Subjects: Biological Physics (physics.bio-ph) ; Dynamical Systems (math.DS) ; Space Physics (physics.space-ph)

[35] arXiv:2410.19089 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Self-organized homogenization of flow networks Show Chinese title

Title: 流动网络的自组织均质化

Julien Bouvard, Swarnavo Basu, Charlott Leu, Onurcan Bektas, Joachim O. Rädler, Gabriel Amselem, Karen Alim

Subjects: Biological Physics (physics.bio-ph) ; Fluid Dynamics (physics.flu-dyn)

[36] arXiv:2410.20506 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: A twenty-first century statistical physics of life Show Chinese title

Title: 二十一世纪的生命统计物理

Pankaj Mehta

Comments: 13 pages; Essay written for Chan Zuckerberg Theory in Biology Initiative

Subjects: Biological Physics (physics.bio-ph) ; Soft Condensed Matter (cond-mat.soft) ; Statistical Mechanics (cond-mat.stat-mech) ; Other Quantitative Biology (q-bio.OT)

[37] arXiv:2410.20648 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Life at low Reynolds number isn't such a drag Show Chinese title

Title: 低雷诺数下的生活并不那么费力

Sujit S. Datta

Subjects: Biological Physics (physics.bio-ph) ; Soft Condensed Matter (cond-mat.soft) ; Statistical Mechanics (cond-mat.stat-mech) ; Cell Behavior (q-bio.CB) ; Populations and Evolution (q-bio.PE)

[38] arXiv:2410.21186 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Molecular sorting on a fluctuating membrane Show Chinese title

Title: 分子在波动膜上的分选

Damiano Andreghetti, Luca Dall'Asta, Andrea Gamba, Igor Kolokolov, Vladimir Lebedev

Subjects: Biological Physics (physics.bio-ph)

[39] arXiv:2410.21488 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: The Interplay of Heterogeneity and Product Detachment in Templated Polymer Copying Show Chinese title

Title: 模板聚合物复制中异质性与产品脱离的相互作用

Jeremy E. B. Guntoro, Benjamin J. Qureshi, Thomas E. Ouldridge

Subjects: Biological Physics (physics.bio-ph) ; Statistical Mechanics (cond-mat.stat-mech) ; Chemical Physics (physics.chem-ph)

[40] arXiv:2410.23735 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Physics of collective transport and traffic phenomena in biology: progress in 20 years Show Chinese title

Title: 生物中集体输运和交通现象的物理：20年的进展

Debashish Chowdhury, Andreas Schadschneider, Katsuhiro Nishinari

Comments: 17 pages including 8 figures; to be submitted to "Physics of Life Reviews"

Subjects: Biological Physics (physics.bio-ph) ; Statistical Mechanics (cond-mat.stat-mech) ; Cellular Automata and Lattice Gases (nlin.CG) ; Quantitative Methods (q-bio.QM)

[41] arXiv:2410.24009 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Modeling Full-Scale Leaf Venation Networks Show Chinese title

Title: 建模全尺寸叶片脉络网络

Lars Erik J. Skjegstad, Julius B. Kirkegaard

Subjects: Biological Physics (physics.bio-ph) ; Quantitative Methods (q-bio.QM)

[42] arXiv:2410.24110 (cross-list from physics.bio-ph) [cn-pdf, pdf, other]

Title: Extended electrochemical monitoring of biomolecular binding using commercially available, reusable electrodes in microliter volumes Show Chinese title

Title: 使用商用可重复电极在微升体积中进行生物分子结合的扩展电化学监测

Jeremy Mendez, Yae Eun Kim, Nafisah Chowdhury, Alexios Tziranis, Phuong Le, Angela Tran, Rocio Moron, Julia Rogers, Aohona Chowdhury, Elijah Wall, Netzahualcóyotl Arroyo-Currás, Philip Lukeman

Subjects: Biological Physics (physics.bio-ph)

[43] arXiv:2410.24122 (cross-list from physics.bio-ph) [cn-pdf, pdf, html, other]

Title: Multiparameter optimal control of F1-ATPase Show Chinese title

Title: 多参数最优控制的F1-ATP酶

W. Callum Wareham, David A. Sivak

Comments: 8 main text pages, 2 appendices

Journal-ref: Phys. Rev. E 111, 064410 (2025)

Subjects: Biological Physics (physics.bio-ph) ; Statistical Mechanics (cond-mat.stat-mech)

[44] arXiv:2410.00550 (cross-list from cond-mat.mtrl-sci) [cn-pdf, pdf, other]

Title: Exploring the complex interplay of anisotropies in magnetosomes of magnetotactic bacteria Show Chinese title

Title: 探索磁性细菌磁小体中各向异性的复杂相互作用

David Gandia, Lourdes Marcano, Lucía Gandarias, Alicia G. Gubieda, Ana García-Prieto, Luis Fernández Barquín, Jose Ignacio Espeso, Elizabeth Martín Jefremovas, Iñaki Orue, Ana Abad Diaz de Cerio, M. Luisa Fdez-Gubieda, Javier Alonso

Subjects: Materials Science (cond-mat.mtrl-sci) ; Biological Physics (physics.bio-ph)

[45] arXiv:2410.00898 (cross-list from cond-mat.soft) [cn-pdf, pdf, html, other]

Title: Mechanical Interactions Govern Self-Organized Ordering in Two-Dimensional Bacterial Colonies Show Chinese title

Title: 机械相互作用支配二维细菌菌落中的自组织排列

Samaneh Rahbar, Ludger Santen, Reza Shaebani

Comments: 7 pages, 7 figures

Subjects: Soft Condensed Matter (cond-mat.soft) ; Biological Physics (physics.bio-ph)

[46] arXiv:2410.01165 (cross-list from cond-mat.soft) [cn-pdf, pdf, other]

Title: Simulation of Stochastic Non-Equilibrium Thermal Effects of Particle Inclusions within Fluid Interfaces and Membranes Show Chinese title

Title: 粒子包埋在流体界面和膜中的随机非平衡热效应的模拟

Dev Jasuja, Paul J. Atzberger

Comments: 21 pages, 5 figures

Subjects: Soft Condensed Matter (cond-mat.soft) ; Materials Science (cond-mat.mtrl-sci) ; Biological Physics (physics.bio-ph) ; Computational Physics (physics.comp-ph) ; Subcellular Processes (q-bio.SC)

[47] arXiv:2410.01219 (cross-list from cond-mat.soft) [cn-pdf, pdf, html, other]

Title: Organization and Dynamics of Chromosomes Show Chinese title

Title: 染色体的组织与动力学

D. Thirumalai, Guang Shi, Sucheol Shin, Changbong Hyeon

Subjects: Soft Condensed Matter (cond-mat.soft) ; Biological Physics (physics.bio-ph) ; Chemical Physics (physics.chem-ph) ; Genomics (q-bio.GN)

[48] arXiv:2410.01269 (cross-list from q-bio.NC) [cn-pdf, pdf, other]

Title: The exponential distance rule based network model predicts topology and reveals functionally relevant properties of the Drosophila projectome Show Chinese title

Title: 基于指数距离规则的网络模型预测拓扑结构并揭示果蝇投射组的功能相关特性

Balazs Pentek, Maria Ercsey-Ravasz

Comments: 40 pages in total (34 main article + 4 pages the SI); 8 figures in the main text and 7 figures in the supplementary information

Subjects: Neurons and Cognition (q-bio.NC) ; Biological Physics (physics.bio-ph)

[49] arXiv:2410.01499 (cross-list from physics.data-an) [cn-pdf, pdf, other]

Title: Manifold-based transformation of probability distributions: application to the inverse problem of reconstructing distributions from experimental data Show Chinese title

Title: 基于流形的概率分布变换：应用于从实验数据中重构分布的反问题

Tomotaka Oroguchi, Rintaro Inoue, Masaaki Sugiyama

Comments: 66 pages, 23 figures

Subjects: Data Analysis, Statistics and Probability (physics.data-an) ; Statistical Mechanics (cond-mat.stat-mech) ; Biological Physics (physics.bio-ph)

[50] arXiv:2410.02211 (cross-list from cond-mat.soft) [cn-pdf, pdf, html, other]

Title: Solvent-cosolvent attraction is sufficient to induce polymer collapse in good solvent mixtures Show Chinese title

Title: 溶剂-共溶剂吸引力足以在良好溶剂混合物中引起聚合物坍塌

Hitesh Garg, Divya Nayar, Satyavani Vemparala

Comments: 10 pages and an ancillary file

Subjects: Soft Condensed Matter (cond-mat.soft) ; Biological Physics (physics.bio-ph) ; Chemical Physics (physics.chem-ph)