Computer Science > Databases
[Submitted on 12 Jun 2025
(v1)
, last revised 13 Jun 2025 (this version, v2)]
Title: S3Mirror: Making Genomic Data Transfers Fast, Reliable, and Observable with DBOS
Title: S3Mirror:利用DBOS实现基因组数据传输的快速、可靠和可观察性
Abstract: To meet the needs of a large pharmaceutical organization, we set out to create S3Mirror - an application for transferring large genomic sequencing datasets between S3 buckets quickly, reliably, and observably. We used the DBOS Transact durable execution framework to achieve these goals and benchmarked the performance and cost of the application. S3Mirror is an open source DBOS Python application that can run in a variety of environments, including DBOS Cloud Pro, where it runs as much as 40x faster than AWS DataSync at a fraction of the cost. Moreover, S3Mirror is resilient to failures and allows for real-time filewise observability of ongoing and past transfers.
Submission history
From: Alex Poliakov [view email][v1] Thu, 12 Jun 2025 16:50:04 UTC (104 KB)
[v2] Fri, 13 Jun 2025 01:44:10 UTC (104 KB)
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